Mohammad Shabbir Hasan


Ph.D. Student, Computer Science, Virgina Tech

Publications

 

[My Google Scholar Profile]

Book Chapter

[B01] Mohammad Shabbir Hasan and Zhong-Hui Duan, Hierarchical K-Means: A Hybrid Clustering Algorithm and Its Application to Study Gene Expression in Lung Adenocarcinoma, Emerging Trends in Computational Biology, Bioinformatics, and Systems Biology - Algorithms and Software Tools, pp. 51-67, Elsevier/MK, August 2015. [Full Text]

Journal

[JL09] Mohammad Shabbir Hasan, and Liqing Zhang, SPAI: an interactive platform for indel analysis. BMC Genomics, Volume 17:5, pp. 496, August 2016. [Full Text]

[JL08] Mohammad Shabbir Hasan, Xiaowei Wu, and Liqing Zhang, Performance evaluation of indel calling tools using real short-read data. Human Genomics, Volume 9:1, pp. 1-14, August 2015. [Full Text]

[JL07] Dongsheng Che, Mohammad Shabbir Hasan and Bernard Chen, Identifying pathogenicity islands in bacterial pathogenomics using computational approaches. Pathogens, Volume 3:1, pp. 36-56, January 2014. [Full Text]

[JL06] Mohammad Shabbir Hasan, Qi Liu, Han Wang, John Fazekas, Bernard Chen and Dongsheng Che. GIST: Genomic Island Suite of Tools for predicting genomic islands in genomic sequences. Bioinformation, Volume 8:4, pp. 203-205, February 2012. [Full Text]

[JL05] Dongsheng Che, Mohammad Shabbir Hasan, Han Wang, John Fazekas, Jinling Huang and Qi Liu, EGID: an ensemble algorithm for improved genomic island detection in genomic sequences, Bioinformation, Volume 7:6, pp. 311-314, November 2011. [Full Text]

[JL04] Sk Md Nahid Hasan, Mohammad Shabbir Hasan, Abdullah Al Mahmood, Md. Jahangir Alam, A Model for Value Based Requirement Engineering , International Journal of Computer Science and Network Security, Volume 10:12, pp. 171-177, December 2010. [Full Text]

[JL03] Mohammad Shabbir Hasan, Abdullah Al Mahmood, Md Jahangir Alam, Sk Md Nahid Hasan, Farin Rahman, An Evaluation of Software Requirement Prioritization Techniques, International Journal of Computer Science and Information Security, Volume 8:9, pp. 83-94, December 2010. [Full Text]

[JL02] Mohammad Shabbir Hasan, Quazi Farhan and Abdullah Al Mahmood, An Exploratory and Feasibility Study of Implementing Online Based Voting System in Bangladesh, International Journal of Computer Science and Emerging Technologies, Volume 1:3, pp. 125-132, October 2010. [Full Text]

[JL01] K. M. Azharul Hasan and Mohammad Shabbir Hasan, A Parsing Scheme for Finding the Design Pattern and Reducing the Development Cost of Reusable Object Oriented Software, International Journal on Computer Science and Information Technology, Volume 2:3, pp. 40-54, June 2010. [Full Text]

Conference Proceedings

[CP06] Mohammad Shabbir Hasan and Zhong-Hui Duan, A Hybrid Clustering Algorithms and Functional Study of Gene Expression in Lung Adenocarcinoma, Proceedings of the World Comp: International Conference on Bioinformatics and Computational Biology 2014 , pp. 23-29, Las Vegas, USA, July 2014. [Full Text]

[CP05] Dongsheng Che, Mohammad Shabbir Hasan, Han Wang, Bernard Chen and Yong Wei, M Are Better Than One: An Ensemble Method For Genomic Island Prediction, Proceedings of the 6th International Conference on Bioinformatics and Biomedical Engineering 2012, pp. V2: 426-429, Shanghai, China, May 2012. [Full Text]

[CP04] Mohammad Shabbir Hasan, Abdullah Al Mahmood and Quazi Farhan, A Roadmap towards the Implementation of an Efficient Online Voting System in Bangladesh, Proceedings of the International Conference on Software Engineering and Computational Intelligence 2010, pp. 1-4, Wuhan, China, December 2010. [Full Text]

[CP03] Mohammad Shabbir Hasan and K.M. Azharul Hasan, Determining the Most Effective Class for Extending Reusability of Object Oriented System, Proceedings of the International Conference on Educational and Information Technology 2010, pp. V2: 498-502, Chongqing, China, September 2010. [Full Text]

[CP02] K.M. Azharul Hasan and Mohammad Shabbir Hasan, Principal Component Analysis of Coupling Measures for Developing High Quality Object Oriented Software, Proceedings of the 3rd International Conference on Computer and Communication Engineering 2010, pp. 217-222, Kuala Lumpur, Malaysia, July 2010. [Full Text]

[CP01] Mohammad Shabbir Hasan and K.M. Azharul Hasan, Finding the Design Pattern from the Source Code for Developing Reusable Object Oriented Software, Proceedings of the 2nd International Conference on the Applications of Digital Information and Web Technologies 2009, pp. 157-162, London, UK, August 2009. [Full Text]

Short Paper

[SP05] Mohammad Shabbir Hasan, Xiaowei Wu, Layne T. Watson, and Liqing Zhang, UPS-indel: A better approach for finding indel redundancy, Proceedings of the 6th IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) 2016, Atlanta, Georgia, USA, October 2016. [Full Text]

[SP04] Mohammad Shabbir Hasan, Saima Sultana Tithi, Eli Tilevich, and Liqing Zhang, Diagnosing and Treating Code-Duplication Problems in Bioinformatics Libraries, Proceedings of the 6th IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) 2016, Atlanta, Georgia, USA, October 2016. [Full Text]

[SP03] Saima Sultana Tithi and Mohammad Shabbir Hasan, Modeling ebola outbreak: a case study on 2014 outbreak in sierra leone, Proceedings of the 6th ACM International Conference on Bioinformatics, Computational Biology and Biomedicine (ACM BCB) 2015 , pp. 547-548, Atlanta, Georgia, USA, September 2015. [Full Text]

[SP02] Mohammad Shabbir Hasan and Liqing Zhang, SPAI: Single Platform for Analyzing Indels, Proceedings of the 11th International Symposium on Bioinformatics Research and Applications (ISBRA) 2015 , pp. 75-78, Norfolk, Virginia, USA, June 2015. [Full Text]

[SP01] Mohammad Shabbir Hasan and Liqing Zhang, P-Dindel: A multi-thread based tool for calling indels from short reads, Proceedings of the 11th International Symposium on Bioinformatics Research and Applications (ISBRA) 2015 , pp. 71-74, Norfolk, Virginia, USA, June 2015. [Full Text]

Copyright © 2011- Mohammad Shabbir Hasan. All rights reserved.