Mohammad Shabbir Hasan


Ph.D. Student, Computer Science, Virgina Tech

What's New!!


  • Sep 4, 2016: Our short paper titled "Diagnosing and Treating Code-Duplication Problems in Bioinformatics Libraries" has been accepted at the IEEE ICCABS'16, to be held in Atlanta, USA on October 2016.

  • Feb 25, 2016: Got offer from Amazon to join as SDE intern in Summer 2016.

  • Feb 23, 2016: Our paper titled "SPAI: an interactive platform for indel analysis" has been accepted at the BMC Genomics.

  • Aug 2, 2015: Our short paper titled "Modeling ebola outbreak: a case study on 2014 outbreak in sierra leone" has been accepted at the ACM BCB'15, to be held in Atlanta, USA on September 2015.

  • July 16, 2015: Our paper titled "Performance evaluation of indel calling tools using real short-read data" has been accepted at the BMC "Human Genomics" journal.

  • May 7, 2015: Our 2 short papers titled "SPAI: Single Platform for Analyzing Indels" and "P-Dindel: A multi-thread based tool for calling indels from short reads" have been accepted at the ISBRA'15, to be held in Norfolk, USA on June 2015.

  • Feb 4, 2015: Passed PhD Qualifying exam.

  • Jan 19, 2015: Our book chapter "Hierarchical K-Means: A Hybrid Clustering Algorithm and Its Application to Study Gene Expression in Lung Adenocarcinoma" has been accepted at the book "Emerging Trends in Computational Biology, Bioinformatics, and Systems Biology - Algorithms and Software Tools", to be published by Elsevier/MK on August 2015.

  • May 02, 2014: Our paper "A Hybrid Clustering Algorithms and Functional Study of Gene Expression in Lung Adenocarcinoma" has been accepted at the BIOCOMP'14 conference, to be held in Las Vegas, USA on July 2014.

  • January 07, 2014: Our paper "Identifying pathogenicity islands in bacterial pathogenomics using computational approaches" has been accepted at the "Pathogenes" Journal.

  • August 17, 2013: Graduated from the University of Akron with Masters in Computer Science degree.

  • March 22, 2013: Got accepted in the Ph.D. in Computer Science program at Virginia Tech. Will join there from Fall'13 semester.

  • Feb 07, 2012: Our paper "GIST: Genomic island suite of tools for predicting genomic islands in genomic sequences" has been accepted at the "Bioinformation" Journal.

  • Dec 17, 2011: Our paper "M Are Better Than One: an ensemble method for genomic island prediction" has been accepted at the International Conference on Bioinformatics and Biomedical Engineering (ICBBE) 2012.

  • Nov 17, 2011: Our paper "EGID: an ensemble algorithm for improved genomic island detection in genomic sequences" has been accepted at the "Bioinformation" Journal.

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